Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MINKKPRIPSPVQIPEHLSFLQGFRDYLVAQTVSPHTRNAYLSDLIQCSEIHKKN----------RLPDWTSDDISDVLIELTKVGKSPRSIARCLSALRQFYKSLREQKLRSD--NPVAT-----HHSPKIGRALPKDLSEEDVEALIQAPDITT---ALGLRDRAMFEVLYACGLRVSELLNLRLELINLKQGYLR--ITGKGNKERLVPLGQY-ACDWVERYLNEARPQLYKSSTDYLFLTQHGGIMSRQNFWYAIKRYALQANIQ-AELSPHTLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVAQVRMQQLHEKHHPRG 5JJV Chain:B ((67-359)) -------------------------------NAGLLGINTYALPLLKFHEYFSKARLITERLAFNSLKNIDEVMLAEFLSVYT-GGLSLATKKNYRIALLGLFSYIDKQNQDENEKSYIYNITLKNIS----GNKLPTHLNNEELEKFLESIDKIEMSAKVRARNRLLIKIIVFTGMRSNEALQLKIKDFTLENGCYTILIKGKGDKYRAVMLKAFHIESLLKEWLIERELY--PVKNDLLFCNQKGSALTQAYLYKQVERIINFAGLRREKNGAHMLRHSFATLLYQKRHDLILVQEALGHASLNTSRIYTHFDKQRLEEAASI-----

General information: TITO was launched using: RESULT: Template: 5JJV.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 915 7590 8.30 28.86 target 2D structure prediction score : 0.68 Monomeric hydrophicity matching model chain B : 0.70 3D Compatibility (PKB) : 8.30 2D Compatibility (Sec. Struct. Predict.) : 0.68 1D Compatibility (Hydrophobicity) : 0.70 QMean score : 0.510

(partial model without unconserved sides chains): PDB file : Tito_5JJV.pdb: (Unconserved sides chains are recalculated) : Sequence: align-5JJV-query.scw PDB file : Tito_Scwrl_5JJV.pdb: