Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRKDDKIKMALDLLPKSMFEAIDLLPDASTPVTLFTRHSLRELVDGQG-LAG-YDLQLTPQGRELAQEWGSYLIKNTDRVIQHCISSPIQRCVDTAALMIEGADGVSPEPNTHTIEIVEQGLLVEPGSFVLDIQQAAPYFRKQGALGFINSFVN----------------------------NTLPGMKHPITGVLDVLELIYQTHPK---TKSGLSLAVSHDTIIAAIVAVISGNNQIQKADWP-AMMEGLFVWFEGDEFPNCKLKWIWRGKTYELNVSEFHKVQ
4ODI Chain:B ((15-232))-------------------------AK-AKYTLVLIRHGESTW-NKENRFTGWTDVPLSPVGEQEAVEAAKALKEKGF-EFDVAYTSVLQRAVVTCWTVLKGTDMCHIP-----V--KSSWRLNERHYGALQGLNKAETAAKHG-DEQVKIWRRSYDIPPPPLEKSDKRWPGNDAVYKMVPNEALPLTECLKDTVERVLPFWF-DHIAPSIMEGKRVLVAAHGNSLRGLVKHLDKMSDEA--VLELNIPTGVPLVYE-----------------------------


General information:
TITO was launched using:
RESULT:

Template: 4ODI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 858 -9505 -11.08 -51.66
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain B : 0.64

3D Compatibility (PKB) : -11.08
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.352

(partial model without unconserved sides chains):
PDB file : Tito_4ODI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4ODI-query.scw
PDB file : Tito_Scwrl_4ODI.pdb: