Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEKIWFAEYQKTGIPETVALPAENTSLVDIFERNFQKFGSRDAFIFMDKAMSFNELELASRKFATYLQNLGLAKGTRVAVMMPNVLQYPVVALAVLRAGLVLVNVNPLYTARELEHQLNDSGAEVLVIIENFASVYQSILGKTPVKHVVVASVGDMLGTLKGTLVNFVLRKVRKQIPAWNIPGHVKFNSALNKENPSNYKRPTLTLSDTAVLQYTGGTTGVSKGAELTHRNLVANLLQCDGIFQSKFGANDG-AKGDRIVCALPLYHIF---AFMVCAMYGMYKGQANILIPNPRDLPAVIKELRKYQPSFFPAVNTLFNALVNNEEFKQLDHSNLKMAMGGGMAVLPSTAEAWKKITGTTIIEGYGLSET-SPVATANPPASTEFSGTIGIPLPLTEVAILDDDGKEVPLGEQGEISIRGPQVMKGYWNRPDETAKVMTADGFFRTGDIGVMDSRGYVKIVDRKKDMILVSGFNVYPSEIEEVIAKHPKVLEVAAIGVPDEKSGEVPKLFIVKKDPSLTTEEVLNFAKENLTGYKRPRYVEFMDELPKSNVGKILR---KDLRKPV
5GTD Chain:A ((21-484))----------------------------------------RIALIYEDQTVTFAELFAASKRMAEQLAAHSVRKGDTAAILLQNRAEMVYAVHACFLLGVKAVLLNTKLSTHERLFQLEDSGSGFLLTDSSFE--------KKEYEHIVQT---------------------------------IDVDELMKEAAEEIEIEAYMQMDATATLMYTSGTTGKPKGVQQTFGNHYFSAVSS--------ALNLGITEQDRWLIALPLFHISGLSALFKSVIYGM-----TVVLHQRFSVSDVLHSINRHEVTMISAVQTMLASLL--EETNRCPESIRCILLGGGPAPLPLLEECREK--GFPVFQSYGMTETCSQIVTLSPEFSMEKLGSAGKPLFSCEIKI-ERDGQVCEPYEHGEIMVKGPNVMKSYFNR-ESANEASFQNGWLKTGDLGYLDNEGFLYVLDRRSDLIISGGENIYPAEVESVLLSHPAVAEAGVSGAEDKKWGKVPHAYLVLHKP-VSAGELTDYCKERLAKYKIPAKFFVLDRLPRNASNKLLRNQLKDARK--


General information:
TITO was launched using:
RESULT:

Template: 5GTD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2570 -94401 -36.73 -207.02
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain A : 0.73

3D Compatibility (PKB) : -36.73
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.481

(partial model without unconserved sides chains):
PDB file : Tito_5GTD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5GTD-query.scw
PDB file : Tito_Scwrl_5GTD.pdb: