Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKIVADENLAFTDYFFSEFGDIQHKAGRTLTHTDVQDAEALLVRSVTAVNESLIQNTALKYVGSATIGTDHLDIQALEKQGITWANAAGCNAQAVAEYVITALLHL------------DASLLEQQEKF-------------TLGIVGLGNVGKRLAYMAQLLGWKVIGFDPFVQLDSIEN-------VSFQTLLQQANAVSIHVPLTKKGEHATYHLFDEKAFAALQPNTILINSARGPVVKEAALIEDIQCTQ-RKVVLDVFEHEPV-ISEGLLNMLA--LATPHIAGYSLEGKARGTQMIYEAFCQKFGYDINKRFETQLPACEDYFSGHDLKAVLKQKLSQIYDIAQYDANIRACVKEGKVEQKAFDLLRKNYPLRREWAAHGGPQA
2OME Chain:A ((51-298))---------------------------------------AMMYHTITLTREDLEKFKALRVIVRIGSGYDNVDIKAAGELGIAVCNIPSAAVEETADSTICHILNLYRRNTWLYQALREGTRVQSVEQIREVASGAARIRGETLGLIGFGRTGQAVAVRAKAFGFSVIFYDPYLQ-DGIERSLGVQRVYTLQDLLYQSDCVSLHCNLN---EH-NHHLINDFTIKQMRQGAFLVNAARGGLVDEKALAQALKEGRIRGAALDVHESEPFSFAQGPLKDAPNLICTPHTAWYS---------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2OME.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 903 -52556 -58.20 -247.90
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.71

3D Compatibility (PKB) : -58.20
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.71
QMean score : 0.464

(partial model without unconserved sides chains):
PDB file : Tito_2OME.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2OME-query.scw
PDB file : Tito_Scwrl_2OME.pdb: