Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLHLHVHPENPQQRLIEQAVERIRAGDVVVYPTDAAYAIGCQIGNKNAMERIAQIRGLGPKHQYAIMCCDLSDIATYAKVDNATYRLLKANTPAITTFILPATS-EVPRRLMHPKKKTIGLRIPSNPICQALLKELGGPLLTSTLILPGQEDPLDDPYDIENQLAKRIDVFIDGGFGTL--TTTSIVDLSGEHPEIIRHGVGDVSAFE
3TTD Chain:A ((109-290))----------EQEAALQAAIAQLKMGNIVAIKGIGGFHLACDARNSNAVATLRARKHRP-AKPLAVMLPVADGLPD------AARQLLTT-PAAPIVLVDKKYVPELCDDI-APGLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPA-ISNEQALEDLQGIADGFLIHNRDIVQRMDDSVVRESG---EMLRRSRGYVP---


General information:
TITO was launched using:
RESULT:

Template: 3TTD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 931 -84468 -90.73 -471.89
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain A : 0.72

3D Compatibility (PKB) : -90.73
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.72
QMean score : 0.606

(partial model without unconserved sides chains):
PDB file : Tito_3TTD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3TTD-query.scw
PDB file : Tito_Scwrl_3TTD.pdb: