Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKMFTKLALVSSLAISANAMAMQSMDDAALSAATGQDGINIGIALGTSGISIDKLYLHDNDGLATTTGITGATGTAGALAISDVTLKQTGTGNLLDLAIDTNGASST---NGAFLNVAATVGAVDIHVGSIGVGTSGTVNETTALRGITETAPTEIISGLDLS--LGQITANVQLGSTPQGAMIK--VDSALKGGLTISNLGINDAAGGGSILLDKVMVRGAGNATGDLDVKADISVTGNGLQVKSTSAQDMNVYVGGVHLGTNTKASDGTWGTGAVKAASIGDLEIQGLNVANTTITISGH
4CG0 Chain:A ((20-212))----------------------------------------------------------------------GLTGSGVKVAVLDTGISTHPDLNIRGGASFVPGEPSTQDGNGHGTHVAGTIAALNNSIGVLGVAPSAELYAVKVLGASGSGSVSSIAQGLEWAGNNGMHVANLSLGSPSPSATLEQAVNSATSRGVLVVAASGNSGAGSISYPARYANAMAVG-ATDQNNNRASFSQYGAGLDIVAPGVNVQSTYPGSTYASLN--------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4CG0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1112 -13935 -12.53 -74.92
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : -12.53
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.260

(partial model without unconserved sides chains):
PDB file : Tito_4CG0.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4CG0-query.scw
PDB file : Tito_Scwrl_4CG0.pdb: