Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMWLSNEGGFYMKKISTLLFIGLVSLGLFGFSIPGFAHGYITSPGSRAYLGTSAAGNLNQNVGRAQWEPQSIEATKNTFIDGKIASAGVSGFEPLDEQTSNRWHKNMVNPGTLNITWNLTAQHRTSTWDYYITKPTWNPNQPLKFSDFELITKIDDKATVPPKTVNQTIT-LPQDRKGYNVILAVWNISDTTNAFYQVIDVNIQ
5VG1 Chain:A ((1-141))------------------------------------HGWVTDPPSRQAL--CASGETSFDCGQISYEPQSVEAPKG----ATTCSGGNEAFAILDDN-SKPWPTTEI-ASTVDLTWKLTAPHNTSTWEYFV--------------DGQLHQTFDQKGQQPPTSLTHTLTDLP---TGEHTILARWNVSNTNNAFYNCMDVVV-


General information:
TITO was launched using:
RESULT:

Template: 5VG1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 715 -34227 -47.87 -244.48
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain A : 0.71

3D Compatibility (PKB) : -47.87
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.71
QMean score : 0.347

(partial model without unconserved sides chains):
PDB file : Tito_5VG1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5VG1-query.scw
PDB file : Tito_Scwrl_5VG1.pdb: