Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMTSLPFPLIEDIGELYMLDDIYDFLGEGTFASVFKAVSTTNRDVVQENQTVALKMIAKRNLSSDKLVRDVINEVHVLRQTAHPNCVRFIECVQTPVYVVIVTEYIEGVELF-QALKDQKFTEAMVLNVMRQLLSALAYLHNTLHIVHRDVKPENVIISTHEAPFRVVLVDFGLARSCERKRPRISRELATHFQRQRPIPVRNMSVESLDCDSPMLATPCGTLKYAAPETVQSITQSAQLSTTKNLLSRLDVYAAGIIMYVMLSGALPFKNFANKASLVMEM-RNSLSFEGPRWAGISAEAIDLNKALLNFDAVSRPHAAEALQYPWFKIYGSALRPLSTEEAQSTPGIPLDSSICERGAMTHAFEAMRATEAALYYNEEETASTSAPVTSHSGLRTPNSRCVSVPFGTNTSAFSNSSSTTTAAQTAQSGYFDFA
3UPX Chain:A ((34-307))------------------------LGKGSFGEVILC-----KDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKN-KIVHRDLKPENLLLESKSKDANIRIIDFGLS---------------THFEA-----------------SKKMKDKIGTAYYIAPEVLHGTYDE-----------KCDVWSTGVILYILLSGCPPF-NGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTY--------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3UPX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1202 -64880 -53.98 -256.44
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain A : 0.70

3D Compatibility (PKB) : -53.98
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.459

(partial model without unconserved sides chains):
PDB file : Tito_3UPX.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3UPX-query.scw
PDB file : Tito_Scwrl_3UPX.pdb: