Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMADSSKVTLSRASPERLVHHHRVRCAALEGETHAPYEVEAEPTQVDSSHRHYLHYGNAAHIGVHWHSSDAVHGGYSEPSAAGELTAESRETGAVNAAPAPTTSSSTSSPTSASTAARTRLSLSHLSPRTAGEGQPASLTHNPPAVHADPAARPAAPMASTGANGCGHPAVSASAEGRLNHVHATGEAGAPSSASSHSTGLPAPTAAPPKDASTTTAAKNHPLASATTHARTGFSNGRLPSHPEPAASTAAGTTRPPSHPQLPLSHPTTSSAAAAAAATFSSGAVAKEGGTNGAGASTSDGADPYARPAIALSVHLLDLYKMVNARYCAQRRLESPGPKYNSGYDDKDGHYLFLPGEVIFQRYIAQEVLGKGSFGTVIRGFDQKRSEAVAMKITRRGSSFRSQAKLELDILLRLNENPALNHL-VVRLLKVFEWQGHLVLVFELLSFNLYQLIKCTRFNGVSLDLVRKFAYQLTHTLLQ-LELQKPHPIIHCDLKPENILLRNQNRSGIRLIDFGSACYTAKRFHRYIQSRFYRSPEVILFLDYGTPIDRWSLACVLVEMHTGVPLFDGRTEAAQLAKIEATLGPIPAGMVAGSPKANRFYYGNATSGFQLKEPIPERRTLESVI--GVTTGGPRGRRLNTPGHDEKAYRE------------FHDFISRFLRYQPEERMSCRDALQHPFLRPLYTSDLQQQKDREVAQPISAPQPPQKQQHTQCSQNSKPQPQSPKNINATTTKMLTSTERSRASALPPAE
5LXC Chain:A ((44-392))---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AKKRQGMTGGPNNGGYDDDQGSYVQVPHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFA----HSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFV---SSKGY------PRYCTVTTLSDGSVVLNGGRSRRGKLRGPPES--REWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLR----------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5LXC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1608 -33162 -20.62 -99.58
target 2D structure prediction score : 0.47
Monomeric hydrophicity matching model chain A : 0.68

3D Compatibility (PKB) : -20.62
2D Compatibility (Sec. Struct. Predict.) : 0.47
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.423

(partial model without unconserved sides chains):
PDB file : Tito_5LXC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5LXC-query.scw
PDB file : Tito_Scwrl_5LXC.pdb: