Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-----------------------MKKSSILFIFILLLCIGLQYETIYYTDGSRSGAEYGLMGVS---------IFLALFYMIPA----------LYFLFRIGKKWELPKKVLILSLLGGMF--LSGWLSSFANTYIHDLLGVLFPDSPFLNAF-ESAIVAPLVEEPLKLLPLVFVLALIPVRKLKFLFLLGIASGLGFQMIEDIG------------YIRTDLPEGFDFTISRILERII----SGIASHWTFSGLAVVGVYLLYRAYKGQKVGKKQGLIV
5WWM Chain:A ((10-323))DWTASILDQAQAPESVADFERLLIGNPNSSVVWMNYMAFQLQLSE---IEKARELAERALKTINFREEAEKLNIWIAMLNLENTFGTEETLEEVFSRACQYMDSYTIHTKLLGIYEISEKFDKAAELFKATAKKFGGEKVSIWVSWGDFLISHNEEQEARTILGNALKALPKRNHIEV--VRKFAQLEFAKGDPERGRSLFEGLVADAPKRIDLWNVYVDQEVKAKDKKKVEDLFERIITKKITRKQAKFFFNKWLQFEESKTIEYVKAKATEYVAS---


General information:
TITO was launched using:
RESULT:

Template: 5WWM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 838 -19595 -23.38 -92.87
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : -23.38
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.287

(partial model without unconserved sides chains):
PDB file : Tito_5WWM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5WWM-query.scw
PDB file : Tito_Scwrl_5WWM.pdb: