Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTNFDILDNQFLSLSENELSDIDGGLAPLVIFGVAVSWKAIAGGTALIGSGLAAGYFLGGD
3AG1 Chain:L ((2-39))--------------------HYEEGPGKNIPFSVENKWRLLAMMTLFFGSGFAAPFFI---


General information:
TITO was launched using:
RESULT:

Template: 3AG1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain L - contact count / total energy / energy per contact / energy per residue : 30 -3979 -132.63 -104.71
target 2D structure prediction score : 0.21
Monomeric hydrophicity matching model chain L : 0.70

3D Compatibility (PKB) : -132.63
2D Compatibility (Sec. Struct. Predict.) : 0.21
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.052

(partial model without unconserved sides chains):
PDB file : Tito_3AG1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3AG1-query.scw
PDB file : Tito_Scwrl_3AG1.pdb: