Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTKTAFLFAGQGAQYLGMGRDFYDQYPIVKETIDRASQVLGYDLRYL-IDTEEDKLNQTRYTQPAILATSVAIY-RLLQEKGYQPDMVAGLSLGEYSALVASGALDFEDAVALVAKRGAYMEEAAPADSGKMVAVLNTPVEVIEEACQKASELGVVTPANYNTPAQIVIAGEVVAVDRAVELLQE-AGAKRLIPLKVSGPFHTSLLEPASQKLAETLAQVSFSDFTCPLVGNTEAAVMQKEDIAQLLTRQVKEPVRFYESIGVMQEAGISNFIEIGPGKVLSGFVKKIDQTAHLAHVEDQASLVALLEK
5DZ6 Chain:A ((4-283))-----YVFPGQGSQKQGMGSGLFDEF---KELTDQADEILGYSIKRLCLENPYSNLNKTQFTQPALYVVNALSYLKKIRDEEVKPDFVAGHSLGEYNALFAAEAFDFETGLQLVRKRGELM---SLISNGGMAAVMGLNEEQVAKAL-KEYHLHDVDIANVNAPYQIVISGKKDEIEKAASLFETMTEVTMVLPLNVSGAFHSRYMNKAKEEFEEFLHAFYFSPPSIPVISNVYAKPYTYEFMKQTLADQINHSVKWTDSISYLMKKAAMEFEEVGPGNVLTGLIHRIKKDA-----------------


General information:
TITO was launched using:
RESULT:

Template: 5DZ6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1537 -8071 -5.25 -29.14
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain A : 0.78

3D Compatibility (PKB) : -5.25
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.593

(partial model without unconserved sides chains):
PDB file : Tito_5DZ6.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5DZ6-query.scw
PDB file : Tito_Scwrl_5DZ6.pdb: