Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNKMERNINMKKWQTCVLGAGSLLCLTACSGKSVTSEHQTKDEMKTEQTASKTSAAKGKEVADFELMGVDGKTYRLSDYKGKKVYLKFWASWCSICLASLPDTDEIAKEAGDDYVVLTVVSPGHKGEQSEADFKNWYKGLDYKNLPVLVDPSGKLLETYGVRSYPTQAFIDKEGKLVKTHPGFMEKDAILQTLKELS
2H1G Chain:A ((40-165))----------------------------------------------------------SDAPNFVLEDTNGKRIELSDLKGKGVFLNFWGTWAEPAKKEFPYMANQYKHFKSQGVEIVAVNVG----ESKIAVHNFMKSYGV-NFPVVLDTDRQVLDAYDVSPLPTTFLINPEGKVVKVVTGTMTESMI--------


General information:
TITO was launched using:
RESULT:

Template: 2H1G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 579 -77293 -133.49 -613.44
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain A : 0.73

3D Compatibility (PKB) : -133.49
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.629

(partial model without unconserved sides chains):
PDB file : Tito_2H1G.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2H1G-query.scw
PDB file : Tito_Scwrl_2H1G.pdb: