Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKNKFFLIAILAMCIVFSACSSNSVKNEENTSKEHAPDKIVLDHAFGQTILDKKPERVATIAWGNHDVALALGIVPVGFSKANYGVSADKGVLPWTEEKIKELNGKANLFDDLDGLNFEAISNSKPDVILAG---YSGITKEDYDTLSKIAPVAAYKSKPWQTLWRDMI---KIDSKALGMEKEGDELIKNTEARISKELEKHPEIKGKIKGKKVLFTMINAADTSKFWIYTSKDPRANYLTDLGLVFPESLKEFESEDSFAK----EISAEEANKINDADVIITYG----DDKTLEALQKDPLLGKINAIKNGAVAVIPDNTPLAASCTPTPLSINYTIEEYLNLLGNACKNAK
3LHS Chain:A ((5-266))------------------------------------ASTISVKDENGTVKVPKDAKRIVVLEYSFADALAALDVKPVGI--------ADDGKKKRIIKPVREKIGDYTSVGTRKQPNLEEISKLKPDLIIADSSRHKGINKE----LNKIAPTLSLKS--FDGDYKQNINSFKTIAKALNKEKEGEKRLAEHDKLINKYKD---EIKFD-RNQKVLPAVVAKAGLLAHPNYSY---VGQFLNELGFKNALSDDVTKGLSKYLKGPYLQLDTEHLADLNPERMIIMTDHAKKDSAEFKKLQEDATWKKLNAVKNNRVDIV------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3LHS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1209 1960 1.62 7.90
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain A : 0.68

3D Compatibility (PKB) : 1.62
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.548

(partial model without unconserved sides chains):
PDB file : Tito_3LHS.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3LHS-query.scw
PDB file : Tito_Scwrl_3LHS.pdb: