Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLDLLKQTIFTRDFIFILILLGFILVVTLLLLENRRDNIQLKQINQKVKDLIAGDYSKVLDMQGGSEITNITNNLNDLSEVIRLTQENLEQESKRLNSILFYMTDGVLATNRRGQIIMINDTAKKQLGLVKEDVLNRSILELLKIEENYELRDLITQSPELLLDSQDINGEYLNLRVRFALIRRESGFISGLVAVLHDTTEQEKEERERRLFVSNVSHELRTPLTSVKSYLEALDEGALCETVAPDFIKVSLDETNRMMRMVTDLLHLSRIDNATSHLDVELINFTAFITFILNRFDKMKGQEKEKKYELVRDYPINSIWMEIDTDKMTQVVDNILNNAIKYSPDGGKITVRMKTTEDQMILSISDHGLGIPKQDLPRIFDRFYRVDRARSRAQGGTGLGLSIAKEIIKQHKGFIWAKSEYGKGSTFTIVLPYDKDAVKEEVWEDEVED
4BIZ Chain:A ((62-296))----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGASFNQMVTALERMMTSQQRLLSDISEELRTPLTRLQ-LGTALLRRRSGESKELERIET---EAQRLDSMINDLLVMSR-NQQKNALVSETIKANQLWSEVL---DNAAFEAEQMGKSLTVNFPPGPWPLYGNPNALESALENIVRNALRYSHT--KIEVGFAVDKDGITITVDDDGPGVSPEDREQIFRPFYRTDEARDRE--GTGLGLAIVETAIQQHRGWVKAEDSPLGGLRLVIWLPLYK--------------


General information:
TITO was launched using:
RESULT:

Template: 4BIZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 935 -80421 -86.01 -345.15
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : -86.01
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.433

(partial model without unconserved sides chains):
PDB file : Tito_4BIZ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4BIZ-query.scw
PDB file : Tito_Scwrl_4BIZ.pdb: