Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-----------MHEITLHEVRQLIASLRTVYAAQFNKQFPTSGESAIPLSV-VEQIALKT-----LVGVQQNQFNNALARLLTAGGRFM-------------PSF-AEFRTWCIGESWMSPE--EAWSRACKFTTDRTVVITQITKYALDEV-MYLIEAGQMRAAQDNF-FGTYNVMVAK---AQLKGRQQEFYTPPLQLEHKEPEHTPVSNDEVQK---------QLKSLMERLKINGRKPAPVQKLQAKE-KEPELA-KELGPDPFDNPHEYAEMCRREGMPIPRNILQLIEGANV------------
5KLP Chain:A ((18-342))TQSMRLQQKINDLKPYVRHARGPIKAYGQAALDRASGAVSFAELDATHLDAMVYIENQRNPGLNLKHFRDHYYLIQALQSDGPSAFRAIFPQTCPETGQTLKHHVMADVRLHQGAPTIIITEPAVIVGARYQQLQRHNLTLEDLSESGVPLSQVAIIETQAAATSDDCVMYSLNYAIKAHKNAAQFDDIHHGLQHGTLSTESESRARTTLGALEASSSYSVMHEGAHAAFGADVLPVDFYKHGASLTQAYYLMKRPDGRMAGRVNSEGHSEAENLVQ-RNQAFRVKTQFSASIDGFRLQEIKRVLAAAQR


General information:
TITO was launched using:
RESULT:

Template: 5KLP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1196 34296 28.68 138.29
target 2D structure prediction score : 0.48
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : 28.68
2D Compatibility (Sec. Struct. Predict.) : 0.48
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.077

(partial model without unconserved sides chains):
PDB file : Tito_5KLP.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5KLP-query.scw
PDB file : Tito_Scwrl_5KLP.pdb: