Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence -----------------------------------------------------MQSNNPILTRVETVSDYSQPMTVQGAIQKSVMLTIIAAAVGVALFFYAAFTANVGIAYAASIVGA------------IGGLVLALITTFKPTTAPTLAIPYALFEGAFLGGISFTFQ-----------LKYPGVPLQALLATF-VTTLVMFGLYKFQIIRATEKFKSV-VISASLAIFIVFIVQMVMRLAFGSSIPYIFESNWLGIGFA------AFVAVIAS-LNLILDFDLIETNAAYRAPK-F--MEWL-----CGIAL----------LATLVWMY-----ISFLRL----LGLLSDD---------- 5HYZ Chain:A ((1-375)) SAPILQSLLSCSRAAATDPGLAAAELASVRAAATDAGDPSERLAFYFADALSRRLACGASDELTLCYKTLNDACPYSKFAHLTANQAILEATGAATKIHIVDFGIVQGIQWAALLQALATRPEGKPTRIRITGVPSPLLG--PQPAASLAATNTRLRDFAKLLGVDFEFVPLLRPVHELNKSDFLVEPDEAVAVNFMLQLYHLLGDSDELVRRVLRLAKSLSPAVVTLGEYEVSLNRAGFVDRFANALSY-YRSLFESLDVAMTRDSPERVRVERWMFGERIQRAVGPEEGADRTERMAGSSEWQTLMEWCGFEPVPLSNYARSQADLLLWNYDSKYKYSLVELPPAFLSLAWEKRPLLTVSAWR

General information: TITO was launched using: RESULT: Template: 5HYZ.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 955 -51946 -54.39 -216.44 target 2D structure prediction score : 0.36 Monomeric hydrophicity matching model chain A : 0.61 3D Compatibility (PKB) : -54.39 2D Compatibility (Sec. Struct. Predict.) : 0.36 1D Compatibility (Hydrophobicity) : 0.61 QMean score : 0.109

(partial model without unconserved sides chains): PDB file : Tito_5HYZ.pdb: (Unconserved sides chains are recalculated) : Sequence: align-5HYZ-query.scw PDB file : Tito_Scwrl_5HYZ.pdb: