Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTKKGSFMPASTSQYYTRTAQILHWVMAIIFITAWVIGFYSGNFL-SYD-----------VDGSFKGDVITLHKNIATTIIFLVVIRLFWRYTHPAPQLPDTMSPTMKTLAHIGHLLLYVILVALPVTGCLFSWSAGHPA------PVLYLFEIPRLV-----------QDNPELLAIVKPLHIYISWFAGFLIVGHVLAALKHHFVDKDNVLNSMTKQPK
3L71 Chain:C ((33-203))---------------------NFGSLLAVCLMTQILTGLLLAMHYTADTSLAFSSVAHTCRNVQYGWLIRNLHANGASFFFICIFLHIGRGLYYGSYLY---------KETWNTGVILLLTLMATAFVGYVLPWGQMSFWGATVITNLFS--AIPYIGHTLVEWAWGGFSVDNPTLTRFFALHFLLPFAIAGITIIHLTFLHE------------------


General information:
TITO was launched using:
RESULT:

Template: 3L71.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 378 -59259 -156.77 -417.32
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain C : 0.62

3D Compatibility (PKB) : -156.77
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.172

(partial model without unconserved sides chains):
PDB file : Tito_3L71.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3L71-query.scw
PDB file : Tito_Scwrl_3L71.pdb: