Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNHVMCVMSYSLKMVLNHEEDTQRLAQALAQHVQAGVIYLIGDLGAGKTTLTRYFLQALGHKGSVKSPTYTLVEPYKINNKEIFHFDLYRLNDPYELELMGIRDYLDIQDALFLFEWPSKGGDEIPEADIVIDIQKSDDELNRFVTLTLPTEHLYQTLQEQLHD
3NWJ Chain:A ((86-140))----------------------KKKAEEVKPYLNGRSMYLVGMMGSGKTTVGKIMARSLGY-------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3NWJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 54 -9961 -184.45 -255.40
target 2D structure prediction score : 0.74
Monomeric hydrophicity matching model chain A : 0.58

3D Compatibility (PKB) : -184.45
2D Compatibility (Sec. Struct. Predict.) : 0.74
1D Compatibility (Hydrophobicity) : 0.58
QMean score : 0.634

(partial model without unconserved sides chains):
PDB file : Tito_3NWJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3NWJ-query.scw
PDB file : Tito_Scwrl_3NWJ.pdb: