Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMENDMKKISLVIAASTMSLSVFAAAPITNKSPAKDQFSYSYGYLMGRNNTDALTDLNLDIFYQGLQEGAQNKTARLTDEEMAKAINDYKKTLEAKQLVEFQKQGQQNAQAGAAFLAENTKKSGVITTKSGLQYQVLKEGTGKTPKATSRVKVNYEGRLLDGTVFDSSIARNHPVDFQLN--QVIAGWTKGLQTMKEGGKTRFFIPAKLAYGEVGAGDSIGPNSTLIFDIELLQVLPK
4GIV Chain:A ((92-209))--------------------------------------------------------------------------------------------------------------------EQIGGSTVVTTESGLKYEDLTEGSGAEARAGQTVSVHYTGWLTDGQKFGSSKDRNDPFAFVLGGGMVIKGWDEGVQGMKVGGVRRLTIPPQLGYGARGAGGVIPPNATLVFEVELLDV---


General information:
TITO was launched using:
RESULT:

Template: 4GIV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 553 -3159 -5.71 -27.23
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.68

3D Compatibility (PKB) : -5.71
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.524

(partial model without unconserved sides chains):
PDB file : Tito_4GIV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4GIV-query.scw
PDB file : Tito_Scwrl_4GIV.pdb: