Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKYCQFFSVLALGLSAASCAVTSGLQTYDIPSEGVYKTDLGTTVNVVKISQETLPAIQPAQIDYQRDYASLFKNQQTIYRLSPGDVLSIQLWAYPEIAPPVNNISNEQSVQAYGYPIDQTGYIQFPLVGRYKAAGKTLAQVNRELHSQLARFLKNPDVVVRVVSYEGQRFS----VQGSVTKGGQFYLSDQPVSIYTALGMAGGVTTTGDN----------------TYIQLIRNGRTYNLNTIDLEKAGYSLHKLLVQPNDTIYVSTRENQKIYVMGESGKNQALPMRDQGMSLTDALGESLGINPLSGSASRIYVVRTNPNDRTTEIYHLNLMSIGDFGLANQFRLRSNDVVYVDATGLTRWQRIVNQIIPFSNALYNIDRLGQ
5K69 Chain:A ((58-162))---------------------------------------------------------------------------------------------------------------------------------------------------------------------------LVPKLTASVTDGAVGVTVDAPVSVTAADGVLAAVTMVNDNGRPVAGRLSPDGLRWSTTEQLGYN-RRYTLNATALGLGGAATRQLTFQTSSPAHLTMP-----YVMPGDGE--------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5K69.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 378 3468 9.17 40.79
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain A : 0.55

3D Compatibility (PKB) : 9.17
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.55
QMean score : 0.113

(partial model without unconserved sides chains):
PDB file : Tito_5K69.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5K69-query.scw
PDB file : Tito_Scwrl_5K69.pdb: