Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPAVPHSSLNPVLIQLEQVSVHRDQRDILKKVDFALHENEIVTLIGPNGAGKSTLIKVLLGILKPSSG------RVISN---KKLKMAYVPQKFNPSHSLPLR--VQDLLDLEKCSPALRQEIIQDT----GIAKLQQSKVQQLSGGERQRVLLARALLRKPDILVLDEPMQGLDIQSEAELYEYVRSLPERYGCAILIVSHDLQWVMQGTQRVVCLNKHICCS-GLPESIQQHPEYQAIFGTHRVFYQHHHDHCAHGDAAHPCPHNNRPHIHPEPEA
4TQU Chain:S ((5-226))-------------VSIQNVVKRYDKTTVVHGVSLDIEPGEFVVLVGPSGCGKSTTLRMVAGLEEISGGTIRIDGRVINDLAPKDRDVAMVFQNYALYPHLNVRDNISFGLRLKRTKKSVIDAAVKTAADILGLQPLLERKPSDLSGGQRQRVAMGRAIVRDPKVFLFDQPLSNLDAKLRTQMRAEIKRLHQRLGTTVIYVTHDQVEAMTLADRIVVMRDGLIEQIGKPMDLFLHP-------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4TQU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain S - contact count / total energy / energy per contact / energy per residue : 1017 -38001 -37.37 -184.47
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain S : 0.74

3D Compatibility (PKB) : -37.37
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.511

(partial model without unconserved sides chains):
PDB file : Tito_4TQU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4TQU-query.scw
PDB file : Tito_Scwrl_4TQU.pdb: