Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFKSFFPSPRYFFISVVIWLALNMVLWYTGGDHWGQYLGFPQGYADAELPIGVSRFWSPAFLWFYLWFLVSTALFAGFWKIISNNPWQRWSIWGAAFILFNIWFAVQVNVAINAWYVPFWDLIQKMLSSGGGDISTLYSETLVFLYIAMVYVTLGVITAFF----TSHYVFRWRTAMNEYYTEH---WEKLRHIEGASQRVQEDTMRFATIMEDLGVELVKSVITLIAFLPILFHL-SKYVLVLPLVGELNHSLVWAAIVWSIFGTVLLMVVGIKLPGLQFNNQKVEAAYRKELVYGEDHAE--RA--QPVTLKELFANVRKNYFRLYFH----YAYFNMTATWYGQLDILYNLVVLFPSIAAGKLTLGLMQQIMNVFGRVRDSFQYLISSWKTIIELLSIYKRLKAFESILHK
5EG1 Chain:B ((29-326))--------------------------------------------------------------------------------------------------LFITSLSSIIISISPLILAKITDLLSGSLS--NFSYEYLVLLACLYMFCVISNKASVFLFMILQSSLRINMQKKMSLKYLRELYNENITNLSKNNAGYTTQSLNQASNDIYILVRNVSQNILSPVIQLISTIVVVLSTKDWFSA-------------GVFFLYILVFVIFNTRLTGSLASLRKHSMDITLNSYSLLSDTVDNMIAAKKNNALRLISERYEDALTQENNAQKKYWLLSSKVLLLNSLLAVILFGSVFIYNILGVLNGVVSIGHFIMITSYIILLSTPVENIGALLSEIRQSMSSLAGFIQRHAE---


General information:
TITO was launched using:
RESULT:

Template: 5EG1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 855 -84058 -98.31 -298.08
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain B : 0.56

3D Compatibility (PKB) : -98.31
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.56
QMean score : 0.281

(partial model without unconserved sides chains):
PDB file : Tito_5EG1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5EG1-query.scw
PDB file : Tito_Scwrl_5EG1.pdb: