Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MNFIKKWSVGLLSMLPVLAMAHPGHDHVHSGFMAGFIHPFTGLDHLIMALG---FGVLLWSAAKQWKIAGVITLSITLVIGFLVGAQGLVPANVAEYGIVTSLIITAIALWTKSNRILPIAAALLASFHGMAHGVELAHAGHIVALVTGMVAGMALIYCGGLALGAVFTRYVPYGKKIVGACAALVAVIGLS--------------------------------------------------------------------------------------------------------------
5TXE Chain:A ((35-686))APPVTPEVLVRLADIGTMSASETTPLLSLSPDGRYVAFQVRQADPVTNLNVFRMVVKATDGATDAIDVDVGGEYLFWTIPSWGYARNAPSGANLTIQPRWSPSGTHLAYLRQDQGRVRVWRASVKGEGASPVIEDAYDIEDVQWLDDNTLIYSGRPGFVEAEAEIEREGRRGWVYDERFHPLTGARPRVLEPISIVYQVLDLKTGTRRAATPTEVARLREKPDPLRAMVGRTTFSVSRTDPQNINAPTTLVARRGEGEPVRCDEEACQNITRMWGDETANVLYFLRREGWASNEMALYRMPADALKPVRIWHATGLLQGCERQAKRLICAQESALQPRRLVTLNLTSGQMSPLYDPNPDLSRYRLPKVERLTLRNRNGIEVFSDLVLPPDYQLG--TRLPLVIVQYSSR---------GFLRGGTGDENPILPLATAGFAVLSFHSPRSEASYQRFTS--------PIAQSKAEYSNWRNRWNILHTLEDLIDDLDRRGVIDPARVGLTG----LADGATTVHFGLINS--HRFAAAVTSSCCTD-----SFTASVMNGPRISGALKAY----GIETDQADDGPFWAATSFVVNASRLDTPLLIQSADEEYLGALPGFTALQQARKPVELIIYPNEHHVKWQPAHRLAVYNRTIDWFRFWLMDQSDPAPDKAAQYDRWRALRALRQ


General information:
TITO was launched using:
RESULT:

Template: 5TXE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 653 -55572 -85.10 -358.53
target 2D structure prediction score : 0.33
Monomeric hydrophicity matching model chain A : 0.55

3D Compatibility (PKB) : -85.10
2D Compatibility (Sec. Struct. Predict.) : 0.33
1D Compatibility (Hydrophobicity) : 0.55
QMean score : 0.100

(partial model without unconserved sides chains):
PDB file : Tito_5TXE.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5TXE-query.scw
PDB file : Tito_Scwrl_5TXE.pdb: