Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFMTESRLTHLKQLEAESIHIIREVAAEFENPVMLYSIGKDSAVMLHLALKAFYPAKLPFPLLHVDTGWKF-KDMIAFRDNMAKTHGFDLIVHQNKEGREA---GINPFDHGSSKYTDIMKTQALKQALDKYQFDAAFGGARRDEEKSRAKERVYSFRDSKHRWDPKNQRPELWNLYNGKVNKGESIRVFPLSNWTELDIWQYIYLENIQIVPLYFSAVRPVVERSGTLIMVDDERMRLKEGEVPQMKSVRFRTLGCYPLTGAVESEADTLPEIIQEMLLATSSERQGRMIDHDEAGSMEKKKQEGYF
5TW7 Chain:C ((208-417))----------MPNYIEEAVAKIREQVGS-DEVILGLSGGVDSSVAAALIHRAIG---DQLTCVFVDHGLLRLNEGKMVMDMFARNLGVKVIHVDAEGQFMAKLAGVTDPEKKRKIIGAEFIEVFDAEEKKLTNAKWLAQGTIYPDVIE------------------------------------KLKLLEPLRDLFKDEVRELGVALGLPREMVYRH---------------------------------PFPGPGLGVRILGE--------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5TW7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 819 -51695 -63.12 -292.06
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain C : 0.60

3D Compatibility (PKB) : -63.12
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.407

(partial model without unconserved sides chains):
PDB file : Tito_5TW7.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5TW7-query.scw
PDB file : Tito_Scwrl_5TW7.pdb: