Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQRQLVSSSRVEQKNWDRP-----------VLSEWIEQFVNTVQAVQ-TPVQIVAHSFGCLTSVAALAEHPELQLQVKKLILVAPANPARFGEA------------GF------------AR---------HS-LTDY---------------K---DYFH--Q--LKINVPATLLISENDPWLDFFDALQLAKSW-Q-LTPINLGQVGHINVASGFGPFPDLLNHLLPEDSMCSHSSIDPVKTHFSLKFA
4IHA Chain:A ((47-267))------RVVLYDLVCAGSVNPDHFDFRRYDNLDAYVDDLLAILDALRIPRCAFVGHSVSAMIGILASIRRP---DLFAKLVLIGASPRFLNDSDYHGGFELEEIQQVFDAMGANYSAWATGYAPLAVGADVPAAVQEFSRTLFNMRPDISLHVCQTVFKTDLRGVLGMVRAPCVVVQTTRDVSVPASVAAYLKAHLGGRTTVEFLQTEGHLPHLSAPSLLAQVLRRALAR---------------------


General information:
TITO was launched using:
RESULT:

Template: 4IHA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 496 -27003 -54.44 -178.82
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : -54.44
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.452

(partial model without unconserved sides chains):
PDB file : Tito_4IHA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4IHA-query.scw
PDB file : Tito_Scwrl_4IHA.pdb: