Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQVYLVGGAVRDYLLGHSYQEKDYVVVGATPEHM--LAQGFQPVGKDFP---VFLHPETKEEYAL--ARTERKSGQGYHGFQFFTDTTVSLEDDLIRRDLTINAIAMD-QDGKIYDPYGGQNDLENKILRHVSEA---FAEDPLRVLRVARFAARYFPYGFQIAPETLQLMQTMADSGELDALTPERVWKETSRALMENHADIYFQTLRDCGALKHLFPEIDALFGVPQRPEYHPEVDCGIHTLMSLQQACKSNYSLDVRFAVLVHDLGKALTPAKELPRHIMHEERGIKPVTQLCERLRVPTQTKQLALSVCKEHLKCHQIMSLKPGTLWRLLQRLDVLRRPERVEAFVQACECDAKGRLGLEDRPYPQAQYMREAMQIVRSIKVQDLPENIKGAEIGEMLIQYRIEALAEFKNQHQSLSHS
3AQN Chain:A ((34-256))-EAWLVGGGVRDLLLGKKPKDFD-VTTNATPEQVRKLFRNCRLVGRRFRLAHVMFGPEIIEVATFRG------------------NIFGSIEEDAQRRDFTINSLYYSVADFTVRDYVGGMKDLKDGVIRLIGNPETRYREDPVRMLRAVRFAAK---LGMRISPETAEPIPRLATL--LNDIPPAHLFEESLKLLQAGYGYETYKLLCEYHLFQPLFPTITRYF------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3AQN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 815 -9243 -11.34 -48.90
target 2D structure prediction score : 0.51
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : -11.34
2D Compatibility (Sec. Struct. Predict.) : 0.51
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.589

(partial model without unconserved sides chains):
PDB file : Tito_3AQN.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3AQN-query.scw
PDB file : Tito_Scwrl_3AQN.pdb: