Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSSDHAHYWS--VFFFVLILYAYHHGIFRSSTSLQAFIQQFGKYAVMIFVLLQVIQVIIPILPGGISSVAGMLMFGNGFGLLYSCIGLVIGEAIGFLLVRYYGVAFVQLILSPKKYQKFDELLTRKTKDIKKVLVVTLLLPFAPDDLICLVAGLTKLSFREFMQIVIFLKPWSVGVYSMIMLFLFHQAQGHL
4ER8 Chain:A ((1-165))MSEYRRYYIKGGTWFFTVNLRN------RRSQLLTTQYQMLRHAIIKVKRDRPFEINAWVVLPEHMHCIWTLPEGDDDFSSRWREIKKQFTHACGL---------------KNIWQPRFWEHAIRNTKDYRHHVDYIYINPVKHG-WVKQVSDWPFSTFHRDVARGLYPIDWAGDVTDFSAGERIIS-----


General information:
TITO was launched using:
RESULT:

Template: 4ER8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 710 -55456 -78.11 -340.22
target 2D structure prediction score : 0.44
Monomeric hydrophicity matching model chain A : 0.59

3D Compatibility (PKB) : -78.11
2D Compatibility (Sec. Struct. Predict.) : 0.44
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.266

(partial model without unconserved sides chains):
PDB file : Tito_4ER8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4ER8-query.scw
PDB file : Tito_Scwrl_4ER8.pdb: