Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFRRYPYSDSSNSEEKRRKNMKYFQLVLTLITAMVIEVLEQKLA
5BRM Chain:G ((7-28))----GMKRNATSPQVQRPSFMDYFD-------------------


General information:
TITO was launched using:
RESULT:

Template: 5BRM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain G - contact count / total energy / energy per contact / energy per residue : 6 1057 176.17 50.33
target 2D structure prediction score : 0.10
Monomeric hydrophicity matching model chain G : 0.52

3D Compatibility (PKB) : 176.17
2D Compatibility (Sec. Struct. Predict.) : 0.10
1D Compatibility (Hydrophobicity) : 0.52
QMean score : 0.580

(partial model without unconserved sides chains):
PDB file : Tito_5BRM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5BRM-query.scw
PDB file : Tito_Scwrl_5BRM.pdb: