Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence--MNKMSEKYQVTKKDLRKANYRWLMSVC-TFNYQTQQGASVTYALS----PILRKLYKDDDEYIEALNNHFQYYNTQPW-------------LAAIILGACVAMEEKQGLEAKDAINDFKVGTMGPIAGIGDSLLMTMIPTIMGSIAAYMALENNPVGIFLWFILIMVIFFFRMRGFEFGYKQGMKIVTEYGEKINYLTE--AASVLGLTVVGSLI--------ASVISVSTPLKFTFGE-VSMKIQPMLDKI-----LPTLIPVIIT--AAAYYLLSKKKISMTILIL--------LVIVFAMVMAAFGILA-------
5CZL Chain:A ((23-337))LPRAWADTAWESYKSRFMMADGRIVDTGNGSVSHTEGQGFAMLLAVAKNDRPAFDKLWQWTDKTLRNKDNGLFYWRYNPVAPDPIADKNDATDGDTLIAWALLRAQQQWGDKSYGIASDAITASLLKSTVITFAGHQVMLPGAKGF------NRNDHVNLNPSYFIFPAWQAFAARTHLTAWRKLQSDGKALLGKMAWGKAQLPSDWVALRADGRMEPAKEWPPRMSYDAIRIPLYLSWADPQSALLTPWKSWFQSYPRLQTPAWVNVNTNDVAPWFMTGGLLAVRDLTTGEAQDDPQLSAQDDYYSASLKMLVWLAKNDR


General information:
TITO was launched using:
RESULT:

Template: 5CZL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1330 -54435 -40.93 -207.77
target 2D structure prediction score : 0.40
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : -40.93
2D Compatibility (Sec. Struct. Predict.) : 0.40
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.098

(partial model without unconserved sides chains):
PDB file : Tito_5CZL.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5CZL-query.scw
PDB file : Tito_Scwrl_5CZL.pdb: