Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMALAESEEEFFMGLIKAATSMVGGGLADQWLEVIEPDNMSDTTVMTKGVKVRKDDKRGSNRKGTEDVLTDGTVVHVYPNMMMLLVDGGKIIDYTAEEGYYTIKNDAAPSMFNGTLKEAIAETFDRFKFGGVTPQKQQVFYINLQEIKGIKFGTSAPLNYFDNFYNAELFLRAHGTYSIHVVDPILFYTNAIPKNKTQVEINDINEQYLAEFLTALQSAINQMSADGQRISYVPSKSLELSKYMDTALDDSWRELRGMEIVSVAVASISYTDDSVKLINMRNEGAMLGDPSVREGYVQGSIARGMEAAGKNEAGAMTGFMGVGMGMNANGSYLSQAAQNNQEQIKQQAEKQNQQTAQGNADTWTCPVCGTENSGKFCSNCGAAKPVENVQPKLQMRCSECNEIVDLSNGIPKFCPNCGKPFKGIPVN
3BK6 Chain:C ((55-179))------------------------------------------------------------------------------------------------------------------------------------MIFEKAVIVDLRTQVL-DVP---VQETITKD---NVPVRVNAVVYFRVVDPVKAVTQV-KN---------YIMATSQISQTTLRSVIGQA-----HLDELLSERDKLNMQLQRIIDEATD-PWGIKVTAVEIKDVELPAGMQKAMARQ--------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3BK6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 529 -73220 -138.41 -585.76
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain C : 0.59

3D Compatibility (PKB) : -138.41
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.405

(partial model without unconserved sides chains):
PDB file : Tito_3BK6.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3BK6-query.scw
PDB file : Tito_Scwrl_3BK6.pdb: