Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFFQIQYKSSTRDGGNNVNGLFITIEGPDGAGKTSILNELYPLLKEVAKTEIIQTREPGGIPIAEEIRAVILDPKNDRMDERTEALLYAAARRQHLVEKVLPALAKGKIVLCDRFVDSSLAYQGAGRRIGVTEIARLNEFATEGTTPDFTLYLDVDSDTGLRRIKKNRQNQIDRLDSEGLEFHQRVRHAYLKLAEENPERIHKVDARKSFEEVLQTSYHTIIEQYPQFFEN
4EDH Chain:A ((5-196))------------------TGLFVTLEGPEGAGKSTNRDYLAERLRERG-IEVQLTREPGGTPLAERIRELLLAPSDEPMAADTELLLMFAARAQHLAGVIRPALARGAVVLCDRFTDATYAYQGGGRGLPEARIAALESFVQGDLRPDLTLVFDLPVEIGLARAAA--RGRLDRFEQEDRRFFEAVRQTYLQRAAQAPERYQVLDAGLPLAEV------------------


General information:
TITO was launched using:
RESULT:

Template: 4EDH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 887 -57029 -64.29 -297.03
target 2D structure prediction score : 0.70
Monomeric hydrophicity matching model chain A : 0.77

3D Compatibility (PKB) : -64.29
2D Compatibility (Sec. Struct. Predict.) : 0.70
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.511

(partial model without unconserved sides chains):
PDB file : Tito_4EDH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4EDH-query.scw
PDB file : Tito_Scwrl_4EDH.pdb: