Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEVFDMSQVITDKTFNEETDKG--LVLIDFWATWCGPCRMQAPILDQLEQEYDEEEFRIAKMDVDENPETPQQFGIMSIPTLMLKKDGQVVEKAVGVHSKEQLRQMIDQYL
2YJ7 Chain:A ((6-106))---------VTDENFEQEVLKSDKPVLVDFWAPWCGPCRMIAPIIEELAKEY-EGKVKVVKVNVDENPNTAAQYGIRSIPTLLLFKNGQVVDRLVGAQPKEALKERIDKHL


General information:
TITO was launched using:
RESULT:

Template: 2YJ7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 404 12950 32.05 130.81
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain A : 0.85

3D Compatibility (PKB) : 32.05
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.85
QMean score : 0.539

(partial model without unconserved sides chains):
PDB file : Tito_2YJ7.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2YJ7-query.scw
PDB file : Tito_Scwrl_2YJ7.pdb: