Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSVHIEAKEGEIADKILLPGDPLRAKYIAETFLEDPVCYNQVRGMLGFTGKYKGERISVQGTGMGMPSATIYAHELIQSYGVKKLIRVGTCGALSKDVHVRDLVLAQGAATSSSMIEKNFQAFHFPPISDFNLLLKAYEIAKEKGYTVHVGNVLSEDSFYKDDLTETFQLAELGVLGVEMEAAALYYLGAKYHVQTLSLMTVSDHLITGEETTAAERQSTFNEMIEVGLETAIAE
4M3N Chain:A ((26-253))---HISAPPGAVAEAILLPGDPLRAKYIAENFLENPVLYNQVRNMFGYTGTYKGKRVSVQGTGMGIPSASIYIHELVQFYGCKTLIRVGTAGAITERLKLRDLVIAQAACTDSSINNLRFAGQNYAPIATFDLLRRAYEQAQSRGMPVHVGNVLSTDTFYHDQPNPYQLWAQFGVLAVEMEAAGLYTLAAKFGVQALCILTISDHLITGEKTTPQERQETFDQMIEVALET----


General information:
TITO was launched using:
RESULT:

Template: 4M3N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1327 -158005 -119.07 -693.00
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain A : 0.90

3D Compatibility (PKB) : -119.07
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.90
QMean score : 0.555

(partial model without unconserved sides chains):
PDB file : Tito_4M3N.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4M3N-query.scw
PDB file : Tito_Scwrl_4M3N.pdb: