Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MQEMETRYTHSPEDIRHYSTEQLRKEFLVEKVFEPGKISLTYTHNDRMIFGGVTPTEKELEITLDKELGVDYFLERRELGVINIGGPGFIEIDGQKEEMKKQDGYYIGKETRHVVFSSQDAENPAKFYISSVPAHHKYPNVKISIDQVKPMETGEGLTLNERKIYQYIHPNVCESCQLQMGYTILEPGSAWNTMPCHTHERRMEAYVYFDYANEDTRVFHMM-GKPDE---TKH--LVVDNEQAIISPSWSIHSGVGTSNYSFIWAMCGENITYTDMDMVQMDQLK 1IPK Chain:C ((247-338)) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LDIFLSSVDINEGA---LLLPHFNSKAIVILVI--NE---GDANIELVGIK--PLEVQRYRAELSEDDVFVIPAAYPFVVNATSNLNFLAF--------------------

General information: TITO was launched using: RESULT: Template: 1IPK.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 258 -23721 -91.94 -316.28 target 2D structure prediction score : 0.53 Monomeric hydrophicity matching model chain C : 0.58 3D Compatibility (PKB) : -91.94 2D Compatibility (Sec. Struct. Predict.) : 0.53 1D Compatibility (Hydrophobicity) : 0.58 QMean score : 0.372

(partial model without unconserved sides chains): PDB file : Tito_1IPK.pdb: (Unconserved sides chains are recalculated) : Sequence: align-1IPK-query.scw PDB file : Tito_Scwrl_1IPK.pdb: