Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MTLLVKQELFKLIKKKSTAVLSVLLVVLLIGTALLAKKYTTIIDPVEMTAQLFSA-TSWIVFIMIAAASTIISMEAQYGTLKNLLYRKYSRGEILVSKWITLVIYSVYLYLLAIIV---T-VLMKLILFPSISFTEKVSTGQTLIQSLFTYTLGSYIGLWLILSLVL------MIACFINSS--GASISAGIVFYFASSIISGILIALIQKWEWIKWNPISMLN-LQNQIGNEEIMKQLTHLS--TNQMLFGNLAYIV---LFLALGYLVFKRKNV 2PNN Chain:A ((11-258)) --LYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTD--SEFKDPETGKTCLLKAMLN-LHNGQNDTIALLLDVARKTDSLKQFVNASYTDS------------YYKGQTALHIAIERRNMTLVTLLVENGADVQAA-ANGDFFKKT--KGRPGFYFG-ELPLSLAACTNQLAIVKFLLQNSWQPADISAR------DSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQREIH-

General information: TITO was launched using: RESULT: Template: 2PNN.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1123 -87497 -77.91 -382.08 target 2D structure prediction score : 0.40 Monomeric hydrophicity matching model chain A : 0.63 3D Compatibility (PKB) : -77.91 2D Compatibility (Sec. Struct. Predict.) : 0.40 1D Compatibility (Hydrophobicity) : 0.63 QMean score : 0.233

(partial model without unconserved sides chains): PDB file : Tito_2PNN.pdb: (Unconserved sides chains are recalculated) : Sequence: align-2PNN-query.scw PDB file : Tito_Scwrl_2PNN.pdb: