Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFKGVLFDLDGVITDTAEFHYRAWRKLGQEIGITIDHTFNEQLKGVSREDSLSLLLAYGGKEHSFSKEEFAELAKRKNDYYLEMIQTIEPKDVFPGVVPLLDSLKEEKIKIALASASKNGPFLLEKMGLTPYFDAIADPAEATNGKPAPDIFLLAAKAVGLKAEECIGIEDAQAGIQAILSSGAQPIGVGRAEDLGEEIPLVPDTTFLTIDYLKEKWHDHG
4G9B Chain:A ((5-220))-LQGVIFDLDGVITDTAHLHFQAWQQIAAEIGISIDAQFNESLKGISRDESLRRILQHGGKEGDFNSQERAQLAYRKNLLYVHSLRELTVNAVLPGIRSLLADLRAQQISVGLASVSLNAPTILAALELREFFTFCADASQLKNSKPDPEIFLAACAGLGVPPQACIGIEDAQAGIDAINASGMRSVGIG-AGLTGAQL-LLPSTESLTWPRLSAFWQN--


General information:
TITO was launched using:
RESULT:

Template: 4G9B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1056 -152521 -144.43 -706.12
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain A : 0.84

3D Compatibility (PKB) : -144.43
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.84
QMean score : 0.639

(partial model without unconserved sides chains):
PDB file : Tito_4G9B.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4G9B-query.scw
PDB file : Tito_Scwrl_4G9B.pdb: