Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAKAITDATFEQET-KDGLVLVDFWATWCGPCRMQGPILDKLSEELSEDVLKIVKMDVDENPNTARAFGIMSIPTLLFKKDGQVVKQVAGVHTVEQIKAIIAELS
1NSW Chain:C ((2-103))-TMTLTDANFQQAIQGDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHAD-KVTVAKLNVDENPETTSQFGIMSIPTLILFKGGRPVKQLIGYQPKEQLEAQLADV-


General information:
TITO was launched using:
RESULT:

Template: 1NSW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 438 -4840 -11.05 -47.92
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain C : 0.86

3D Compatibility (PKB) : -11.05
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.86
QMean score : 0.521

(partial model without unconserved sides chains):
PDB file : Tito_1NSW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1NSW-query.scw
PDB file : Tito_Scwrl_1NSW.pdb: