Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIVIAMGVCGTGKTLIGELLSERLACEFLDGDTLHSAANKSKMSQGIPLTDEDRLPWLQAIRQAIEAKQRDGETAVFTCSSLKRMYRDILRGQDQNVKFVYLKGSYELLQQRLAERSGHFFDPALLQNQLDTLEEPDVNEA--IAIDIALTPEQIIEQVIQKLGVTDSVCRG
1KOF Chain:B ((10-169))-IYVLMGVSGSGKSAVASEVAHQLHAAFLDGDFLHPRRNIEKMASGEPLNDDDRKPWLQALNDAAFAMQRTNKVSLIVCSALKKHYRDLLREGNPNLSFIYLKGDFDVIESRLKARKGHFFKTQMLVTQFETLQEPGADETDVLVVDIDQPLEGVVASTIE-----------


General information:
TITO was launched using:
RESULT:

Template: 1KOF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 701 -75824 -108.17 -479.90
target 2D structure prediction score : 0.75
Monomeric hydrophicity matching model chain B : 0.80

3D Compatibility (PKB) : -108.17
2D Compatibility (Sec. Struct. Predict.) : 0.75
1D Compatibility (Hydrophobicity) : 0.80
QMean score : 0.553

(partial model without unconserved sides chains):
PDB file : Tito_1KOF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1KOF-query.scw
PDB file : Tito_Scwrl_1KOF.pdb: