Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MQFKPLGHTGINLPEICLGTMTFGEQNTQQEAFEQLNYALEHGLYFWDTAEMYSVPPKPETYGATETILGNWFAQHGQRDKVFLASKIAGPGFGGTHIRDGHTKFNSEHISQAIDGSLKRLKTDYIDLYQLHWPERHTNFFGTLAYGNQQAQNDYDTTP---LEETLLALQKEINRGRIRYIGLSNETPWGTMKFLQLAENLGVSKFVSVQNPYSVLNRTYEIGMSEIAKYEGVGLLAYSPLAFGYLTGKFRNGARPANARVTLFPRFSRYSNPQSEWATEQYAQLAEKHGLSLTQLALAFIKQQFFVTSTIIGATNLDQLKENIQAFEIELSPEILQGIEAIHIQQPNPAP 1LQA Chain:B ((1-346)) MQYHRIPHSSLEVSTLGLGTMTFGEQNSEADAHAQLDYAVAQGINLIDVAEMYPVPPRPETQGLTETYVGNWLAKHGSREKLIIASKVSGPSRNNDKGIRPDQALDRKNIREALHDSLKRLQTDYLDLYQVHWPQRPTNCFGKLGYSWT------DSAPAVSLLDTLDALAEYQRAGKIRYIGVSNETAFGVMRYLHLADKHDLPRIVTIQNPYSLLNRSFEVGLAEVSQYEGVELLAYSCLGFGTLTGKYLNGAKPAGARNTLFSRFTRYSGEQTQKAVAAYVDIARRHGLDPAQMALAFVRRQPFVASTLLGATTMDQLKTNIESLHLELSEDVLAEIEAVHQVYTYPAP

General information: TITO was launched using: RESULT: Template: 1LQA.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1922 -60784 -31.63 -177.21 target 2D structure prediction score : 0.66 Monomeric hydrophicity matching model chain B : 0.88 3D Compatibility (PKB) : -31.63 2D Compatibility (Sec. Struct. Predict.) : 0.66 1D Compatibility (Hydrophobicity) : 0.88 QMean score : 0.565

(partial model without unconserved sides chains): PDB file : Tito_1LQA.pdb: (Unconserved sides chains are recalculated) : Sequence: align-1LQA-query.scw PDB file : Tito_Scwrl_1LQA.pdb: