Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGQLTDASVVLRFGYQAIRRAGLPTEEILTKAGVALNQVDTNARTPLSAQYAFWTAAQEVSKDPDIGLHLGEHL-PLYRGQVIEHLFNSSETFGEGLKRALAYQRLISDAFD-AKLVVE-DG-R--CYLTNGEQVGADNLVNRHF-SECAI-SGVLRFFKFITEG-QFHPIFIDFNFSEGASEDEYFRVYGCPVSLGQKETRLYFDPAILDFQLWQAEPELLQLHEQLAIEKLQELA--R-YDLVGEVRRAIGSTLESGETTLETVAAQLNITPRRLRTQLSEANTSFQQILSDYRCRLAKKLLANTNESVERIVYLTGFSEPSTFYRAFKRWTNETPVEYRKRKQHR
5CHH Chain:A ((12-328))---------------------WRPLNNYLAVQRITP---------PRLPSEALYEWIVLNGRSPLEGLSLGEHYRLSDYG-VAGLALQSAGTVGEALQLIKTNMLLFRKDIRGIAVRRSSCDTVDVDIDLQDKPD--WPQSARLYHANV-LASAAYAVFRDLL-LGELELVRLRLPERN-GDVRAYEEYFRVPVYFAGAGITFTLPEELLEAEIATANSAVFQASLALGSKAFNTRVTREMGGYRQRIVALLEV-LQDRYPSIAWVARQLKVTERTLRRRLADEGTNYREVLDLVRHDRARQLLRDERLRIEEVAERLGYMDTSSFRHAFRRWTGQCANDYRQA----


General information:
TITO was launched using:
RESULT:

Template: 5CHH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1295 -18623 -14.38 -63.13
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain A : 0.68

3D Compatibility (PKB) : -14.38
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.443

(partial model without unconserved sides chains):
PDB file : Tito_5CHH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5CHH-query.scw
PDB file : Tito_Scwrl_5CHH.pdb: