Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAKSFAINMAPTNHGGMIPATQSRTSQEGNLFVRAGDGHMCPKCKCWSVVIKSHDHVIMDGKPVAYVGDKLSCGATIMPQQFHVVGDSGSPYSSAAPVQNSLVEDKSNEIHKVQFKLVDVDTDQPLSAMLYEIHSKES-GK---LLVQGYTDKNGMTAIYESEHTPESVQLITIDLSKPLDPL
3Q1E Chain:D ((13-55))--------------------------------------------------------------------------------------------------------------------VLNAAQGVPGANMTIVLHRLDPVSSAWNILTTGITNDDGRCPG------------------------


General information:
TITO was launched using:
RESULT:

Template: 3Q1E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 79 1846 23.36 47.32
target 2D structure prediction score : 0.44
Monomeric hydrophicity matching model chain D : 0.56

3D Compatibility (PKB) : 23.36
2D Compatibility (Sec. Struct. Predict.) : 0.44
1D Compatibility (Hydrophobicity) : 0.56
QMean score : 0.411

(partial model without unconserved sides chains):
PDB file : Tito_3Q1E.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3Q1E-query.scw
PDB file : Tito_Scwrl_3Q1E.pdb: