Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSTVPFVTCDLLDDNPEKDLQVVTPSMDGKSFKSYGARQTFGGQVVTVKCFEDNSRVKELLATDGTGKVLVVDGGASMRCALMGDMIAESAVKNNWNGVVIYGCVRDVDALATLDLGVHALAAIPQKSNRKGIGEVDIPLYFGGVTIQSGDFIYADNNGIVIAKEKLV
3C8O Chain:B ((3-158))-----YVTPDLCDAYPEL-VQVVEPM-----FSNFGGRDSFGGEIVTIKCFEDNSLVKEQVDKDGKGKVLVVDGGGSLRRALLGDMLAEKAAKNGWEGIVVYGCIRDVDVIAQTDLGVQALASHPLKTDKRGIGDLNVAVTFGGVTFRPGEFVYADNNGIIVSPQAL-


General information:
TITO was launched using:
RESULT:

Template: 3C8O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 970 -126155 -130.06 -808.68
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain B : 0.87

3D Compatibility (PKB) : -130.06
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.87
QMean score : 0.604

(partial model without unconserved sides chains):
PDB file : Tito_3C8O.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3C8O-query.scw
PDB file : Tito_Scwrl_3C8O.pdb: