Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMSSSVPRPNFYLYKTRDEDKEAKMEQKLNSFIEVS--PQSDFTIHNLPYGIFSRTAEGERQVGVAIGDWVIDLAALEKHGLLKLSDQDTYFNQPTLNKFIQSGKANWSKVRKTLQSLLSVDNLTLQENEALRQEVLVKQDSVTLHLPLQVSGYTDFYSSKEHATNVGCMFRAPKNALLPNWTELPVGYNGRASSVVVSGTQVVRPSGQIKHPNEERPVFSVTRKLDFELETAFVIGKPTELGQPISIENAWDHIFGMVLLNDWSARDIQQWEYVPLGPFNSKSFASAISPWVVTLEALEPFKVEGPKQEPKPLAYLQENIANSYDINLSVEIQSPKSTQPDVICRTNFKYMYWSMAQQLTHHTIGGCNVQVGDLMGSGTISGSTPDSYGSLLELTWNTTKPLTLANGETRGFLQDGDTLIMKGHCEKNGIRIGFGEVRNTVLPALTFDFAETSEPNYEAV
4QKU Chain:D ((15-438))-------------------WRATLDPARKSWIETANDPACDFPIQNLPFGIFS-DAKGARRPGVALGDQIVDLAALARAGLVTLPAGADVLAAPTLNAFIALGRDAWRSVRVQLSALFSRDDATLRDDAALRAQVLVAQRDATLHLPVEIPGYTDFYSSKEHATNVGSMFRDPKNALLPNWSEMPIGYNGRASSVVVSGTPVRRPNGQLKLPDQERPVFGACRKLDIELETGFIVGKGNALGEPIACEDAEAHIFGMVLLNDWSARDIQQWEYVPLGPFNSKGFATTISPWIVTLDALEPFRVAQPEQSPQPLAYLRHAGKHAFDIALEVTLRAEGAAEATSICRTNFRHMYWTMAQQLAHHTVAGCNTRVGDLMGSGTISGPTKDSFGSLLELTWNGKEPVALNGGGSRTFIEDGDELTLAGWCQGDGYRVGFGTCAGRILPA----------------


General information:
TITO was launched using:
RESULT:

Template: 4QKU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 2510 -2192 -0.87 -5.19
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain D : 0.87

3D Compatibility (PKB) : -0.87
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.87
QMean score : 0.477

(partial model without unconserved sides chains):
PDB file : Tito_4QKU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4QKU-query.scw
PDB file : Tito_Scwrl_4QKU.pdb: