Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKIYRLSMSLIANTTVVRGRFLDIQQTVSEPTDIPNQVRYLEDGVLISEHGKIKWFGAWEDAQQHLP---AGVEVQHYPEQLIVPGFIDTHIHFPQTEMVG-AYGEQLLSWLNTYTFPTEIQFQDKTYASEIAQFFVQELLKHGTTTALVFCTVHPESVDALFEAAERVQMRLIAGKVLMDRNAPEALCDTPETAYSNTKALIEKWHGKGRALY-AITPRFAPTSTPEQLERAGQLKQEFPDVYVHTHLSENKDEIAWVKSLFPEQAGYLDVYQHYGLTGKR-SVFAHCVHLEDEEWQCMHDTQSAIAFCPTSNLFLGSGLFPLKKTWEKQVKVGLGTDIGAGTSFSLLQTVNEAYKVQ------QLQGDK---LSAYEALYHATLGGAKALDLQDQLGNFNIGKEADFVVLNLKPTALQELRQTKSKSVEDSLFALFTLGDDRNIEATYIYGNRAYQKETAK
2I9U Chain:B ((20-427))-------------------------------TKTSDKFTIMKDSYIVVIDGKI------ASVSSNLPDKYKGNPIIDFRNNIIIPGMNDLHAHASQYKNLGIGMDKELLPWLNNYTFPEEAKFLNVDYAKKTYGRLIKDLIKNGTTRVALFATLHKDSTIELFNMLIKSGIGAYVGKVNMDYNCPDYLTENYITSLNDTEEIILKYKDKSNIVKPIITPRFVPSCSNELMDGLGKLSYKYR-LPVQSHLSENLDEIAVVKSLHKKSNFYGEVYDKFGLFGNTPTLMAHCIHSSKEEINLIKRNNVTIVHCPTSNFNLGSGMMPVRKYLNLGINVVLGSDISAGHTCSLFKVI--AYAIQNSKIKWQESGKKDMFLSTSEAFYMATKKGGSFF---GKVGSFEEGYDFDALVINDSNLYPEDYDLT------ERLERFIYLGDDRNIMKRYVCGNEIF------


General information:
TITO was launched using:
RESULT:

Template: 2I9U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 2334 20741 8.89 52.77
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain B : 0.76

3D Compatibility (PKB) : 8.89
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.478

(partial model without unconserved sides chains):
PDB file : Tito_2I9U.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2I9U-query.scw
PDB file : Tito_Scwrl_2I9U.pdb: