Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPDPKKFERTLDRFGHYAVEAFHYLALFIIGCMIAWSAAHTVFEILTVKKYASIDDILLLFIYLELGAMVGIYFKTNHMPVRFLIYVAITALTRLMISDIQHDHKADLDQVIITGSILILALSILVVRFASWHYPSVMKEKHSKT-PTSLKTPQPQDDELA---
1GD7 Chain:A ((1-109))MTPLEAFQIL----------------------------DLRVGRVLRAEPHEKARK-PSYKLWVDLGPL----------------------GVKQSSAQITELYR----PEDLVGRLVVCAVNLGAKRVAGFLSEVLVLGVPDEAGRVVLLAPDREVPLGGKVF


General information:
TITO was launched using:
RESULT:

Template: 1GD7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 457 -60698 -132.82 -578.08
target 2D structure prediction score : 0.29
Monomeric hydrophicity matching model chain A : 0.55

3D Compatibility (PKB) : -132.82
2D Compatibility (Sec. Struct. Predict.) : 0.29
1D Compatibility (Hydrophobicity) : 0.55
QMean score : 0.143

(partial model without unconserved sides chains):
PDB file : Tito_1GD7.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1GD7-query.scw
PDB file : Tito_Scwrl_1GD7.pdb: