Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMMDLFLNRKSFVVKSLAITVTALMMSGANAATSDKEEIRKLRQEVEALKALVQEQRQVQQQQQQVQQQQQVQLAEVKAQPQPAAAPASPLASLKSKTGADVNLYGFVRGDANYIIEGADNDFADVSKSNGKTQDKLRATAKTTRLGLDFTAPV-SGAKVGGKIELDFASSDND--KSENVRIRHAYLTYN-----NWLFGQTTSNFLS-SHAPEMID-FSTN--------IGGGTTRIPQVRYNYK-LA---PATQLFVSAEEGNSSATGDSVKYRLPVLTAKVTQGYADGNGNASARAFVENYKSG------AGDDKTGWGIAAGTDFKVSDPLKLFADASYVVGNSNYLYGSNSAYTLVNDNIEQNEFVAVQVGGTYKILPNLRSTLAYGAQFADDGTDYAKNNVTANEKVQQAWINFIYTPVKPIDLGVEYVNGKRDTFE---GKSYKDNRVGLMAKYSF
3NSG Chain:B ((6-341))-----------------------------------------------------------------------------------------------KDGNKLDLYGKAVGRHVWTTTGDS----------------KNADQTYAQIGFKGETQINTDLTGFGQWEYRTKADRAEGEQQNSNLVRLAFAGLKYAEVGSIDYGRNYGIVYDVESYTDMAPYFSGETWGGAYTDNYMTSRAGGLLTYRNSDFFGLVDGLSFGIQYQGKNQDNH-SINSQNGDGVGYTMAYEF--DGFGVTAAYSNSKRTNDQQDRDGNGDRAESRAVG--AKYDAN-NVYLAAVYAETRNMSIVENTVT------DTVEMANKTQNLEVVAQYQFDFGLRPAISYVQSKGKQLNGAG----GSADLAKYIQAGATYYFNKNMNVWVDYRFNLLDENDYSSSYVGTDDQAAVGITYQF


General information:
TITO was launched using:
RESULT:

Template: 3NSG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1610 85425 53.06 280.08
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain B : 0.63

3D Compatibility (PKB) : 53.06
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.122

(partial model without unconserved sides chains):
PDB file : Tito_3NSG.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3NSG-query.scw
PDB file : Tito_Scwrl_3NSG.pdb: