Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDFDFNLILVPVTLILFAVWLLDKLVFKQRANKGRENENFVITWAYDFWPVLAVVLVLRSFTYEPFNIPSDSMVPTLETGDFILVNKFDYGVRLPIVNKKVIDVGEPKRGDVIVFRYPPQPTISYIKRVIGLPGDHIVYD--HGQLII-----NGQKIP-KVPTQFS--REKDALDTPTSIYHKETIGDHTFTMREL-------EGVNVARQAPFINYVDN------------GKYANQDGLYWEV-TVPKGHYFAMGDNRDQSADSRFWGFVPEENLTGRAFYVWMHKEPGFHLPSFNRNGKID
1T7D Chain:B ((7-228))-------------------------------------------------------------IYEPFQIPSGSMMPTLLIGDFILVEKFA-------------ETGHPKRGDIVVFKYPEDPKLDYIKRAVGLPGDKVTYDPVSKELTIQPGCSSGQACENALPVTYSNVEPSDFVQT----FS--------SGFFEVPKNETKENGIRLSERKETLGDVTHRILTVPIAQDQVGMYYQQPGQQLATWIVPPGQYFMMGDNRDNSADSRYWGFVPEANLVGRATAIWM------------------


General information:
TITO was launched using:
RESULT:

Template: 1T7D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 694 -14056 -20.25 -82.20
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain B : 0.68

3D Compatibility (PKB) : -20.25
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.435

(partial model without unconserved sides chains):
PDB file : Tito_1T7D.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1T7D-query.scw
PDB file : Tito_Scwrl_1T7D.pdb: