Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAEFIAVILITILAVISPGADFAIVTKNSYLYGRKIGVFTSLGISLGVLVHVTYTLVAVAFVMTYTPQILNIVKYIGALYLIYIGYKTFTQKPVLETTALTAIGTFQAIKYGFFTNALNPKTTLFVISTYTQIVSLTTPKSILLAYGFFMSFAHFVWFSLVAVLFSSMLLRQKMLAKQVQINRVIGSILCVLGVILLFTKFQ
3S8F Chain:C ((18-33))-------------------------------------------------------------------------------------------------------------------------------------------------------TILVFWLGVYAVFFAR-----------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3S8F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 3 -767 -255.50 -47.91
target 2D structure prediction score : 0.75
Monomeric hydrophicity matching model chain C : 0.37

3D Compatibility (PKB) : -255.50
2D Compatibility (Sec. Struct. Predict.) : 0.75
1D Compatibility (Hydrophobicity) : 0.37
QMean score : 0.326

(partial model without unconserved sides chains):
PDB file : Tito_3S8F.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3S8F-query.scw
PDB file : Tito_Scwrl_3S8F.pdb: