Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIINSAQLDQLIDLRDRSELHDILDMMIDQFSDDPFAVKLVIFYDKILFHMQAPIKKICVHFETKQWRNKMVATVTLYLTFTLILDLGIYLFFSKQLLVKNSFGCIALMVVTLLLPIPKVSFPYLVGLLLMFLFYFTTKNLFISCLISNLFFAITGLSFFLVFDLMDYLGKRHLGTASFFALLIAFIFYLLVKSIDKQTRFLNLLFTYPTEHYFGGICILLSWGVIYLVLGSVHFRSSNYLLLSLLSIVISFFSLFFSIMLISFQVKERQHQESLQLYQINEEYYHHLEEFKHDYKSLLFSLKITLQENKKE-----TLEFLEILEDHSAAIFE-------KPQ------IQQLTNI-VSPAVRGVFLKFLEKAESEKIPIQVVIPVEVKTIPIDLVVFIRCLSIFISNAFDHRVADQSPITINLLEEKEGSRFSIANKANPTNLTLSEMVKRGKTSKKNGGLGLYSAKKMLDVYENAELKIEFSK-QNHYFFVEMYLASRKSKSAY
3JZ3 Chain:B ((27-216))--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AQLSDDDPQ----LLQLHSGIDRATRLVDQLLTLSRLDSLDNLQDVAEIPLEDLLQSSVMDIYHTAQQAKIDVRLTLNAHSIKRTGQPLLLSLLVRNLLDNAVRYSPQG-SVVDVTLNADN----FIVRDNGPG---------------------GLSIVQRIAKLHGM---NVEFGNAEQGGFEAKVSWLE-------


General information:
TITO was launched using:
RESULT:

Template: 3JZ3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 535 -182 -0.34 -1.31
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain B : 0.49

3D Compatibility (PKB) : -0.34
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.49
QMean score : 0.562

(partial model without unconserved sides chains):
PDB file : Tito_3JZ3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3JZ3-query.scw
PDB file : Tito_Scwrl_3JZ3.pdb: